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There are some portal in ingress that are not in Pokemon go. So there is no way in pokemon go through which we can edit them or remove them.
If they are misplaced or need editing, you can ask via the Help Chat that appears when you tap the Help page on Wayfarer.
It is important to note that each game uses different inclusion rules and you will see a different game map in each title. Not all Wayspots will be added to all games.
Note that if the wayspots are already in a correct place it's considered abuse to move them to manipulate the playfield for one game.